PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_010907388.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Arecales; Arecaceae; Arecoideae; Cocoseae; Elaeidinae; Elaeis
Family bHLH
Protein Properties Length: 189aa    MW: 21277.6 Da    PI: 8.838
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_010907388.1genomeOGView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH37.44.5e-12249454
                    HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
             HLH  4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54
                    +h  +Er+RR+++N+ +  Lr+l P+    + k+ + a+i   A+e+Ik+L
  XP_010907388.1  2 SHITVERNRRRQMNEHIKVLRSLTPSF---YIKRGDQASIIGGAIEFIKEL 49
                    7999**********************9...9******************99 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF474594.32E-16173IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000831.65E-11154No hitNo description
PROSITE profilePS5088814.646149IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.106.5E-13262IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000104.4E-9249IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003534.3E-10455IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 189 aa     Download sequence    Send to blast
MSHITVERNR RRQMNEHIKV LRSLTPSFYI KRGDQASIIG GAIEFIKELH QVLQSLEAKK  60
RRTSLSPSPT PSPRPLLQLT PSPTSNNTYD PDIVRELGAC CNSPVADVEA KISGSNVLLR  120
TLSKRIPGQV IKIITVLEKW AFEILHLNIS SMEDTVLYSF VIKIGFDCQL SVEELALEVQ  180
QSFSKDITY
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010907388.11e-138PREDICTED: transcription factor MUTE-like
SwissprotQ9M8K61e-83MUTE_ARATH; Transcription factor MUTE
TrEMBLM0TJE81e-104M0TJE8_MUSAM; Uncharacterized protein
STRINGGSMUA_Achr7P21110_0011e-104(Musa acuminata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP111443441
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G06120.15e-78bHLH family protein